doi: 10.7763/IJCTE.2014.V6.880
Simulation of Cell Signaling Communications Using Event-Driven Algorithms
Daniel Huertas González
,
Alfonso Rojas Espinosa
- 1Polytechnic University of Catalonia, Barcelona, Spain.
- 2Telematics Engineering Department, Barcelona Telecommunication Engineering Technical School (ETSETB), Polytechnic University of Catalonia (UPC), Barcelona, Spain.
Abstract
In this paper we present two implementations of event-driven algorithms for simulating molecular dynamics using the Omnet++ Simulation Framework and its Future Event Set (FES) implementation. The first one uses a cell-linked list algorithm. The second one extends the cell-linked list algorithm incorporating a Verlet neighbor list algorithm. We also present results and compare both algorithms over a set of different scenarios. Finally, we discuss the advantages of using the Omnet++ Simulation Framework and the implemented algorithm for simulating cell-signaling communications.
Keywords
- Event-driven
- molecular dynamics
- Omnet++
- particle system
How to Cite
Daniel Huertas González and Alfonso Rojas Espinosa, "Simulation of Cell Signaling Communications Using Event-Driven Algorithms," International Journal of Computer Theory and Engineering, vol. 6, no. 4, pp. 307-312, 2014. https://doi.org/10.7763/IJCTE.2014.V6.880
Copyright & License
Copyright © 2014 by the authors. This is an open access article distributed under the Creative Commons Attribution License which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited (CC BY 4.0).